s3-rust-noodles-bam
Rust+AWS+S3+Lambda+Noodles = Serverless Bioinformatics (by umccr)
fasten
:construction_worker: Fasten toolkit, for streaming operations on fastq files (by lskatz)
| s3-rust-noodles-bam | fasten | |
|---|---|---|
| 2 | 1 | |
| 5 | 75 | |
| - | - | |
| 0.0 | 8.2 | |
| over 1 year ago | 3 months ago | |
| Rust | Rust | |
| - | MIT License |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
s3-rust-noodles-bam
Posts with mentions or reviews of s3-rust-noodles-bam.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-09-29.
fasten
Posts with mentions or reviews of fasten.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-08-02.
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How to effectively multithread in a piped program using Rust?
My colleague wrote a package of binaries that take advantage of piping for its composibility: https://github.com/lskatz/fasten
What are some alternatives?
When comparing s3-rust-noodles-bam and fasten you can also consider the following projects:
Rust-Bio - This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
sage - Proteomics search & quantification so fast that it feels like magic
aws-lambda-events - Rust event types for AWS Lambda
htsget-mvp - A server implementation of the htsget protocol for bioinformatics in Rust
gccontent-benchmark - Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)
krust - counts k-mers, written in rust
rayon - Rayon: A data parallelism library for Rust