coronavirus-dashboard
rt-from-frequency-dynamics | coronavirus-dashboard | |
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38 | 800 | |
46 | 251 | |
- | 0.0% | |
2.5 | 7.1 | |
3 months ago | 6 months ago | |
Mathematica | JavaScript | |
- | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
rt-from-frequency-dynamics
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2/16 Variant Graph Update
Although several XBB.1.5 descendants are growing marginally faster, all variants that aren't XBB+486P are on the decline nationwide. This includes CH.1.1, which has been the clear #2 VOC behind XBB.1 since ~October and which has gotten some press recently.
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California tops 12 million coronavirus cases as XBB.1.5 becomes dominant
State or national variant numbers can currently be best accessed at cov-spectrum; in this link by clicking on "show regions". Covariants provides an even easier-to-read version, but it only separates a few classes of variants and in 2-week intervals. And Bedford labs variant tracker provides a unique perspective of different variant growth, but currently does not separate by states and has irregular updating.
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What we know about Omicron subvariant XBB.1.5 spreading across the U.S.
With variant tracking the main place to follow is the pango-designation project on github (but please do not post there if you go). Cov-spectrum is great for following the epidemiology of variants, as well as bedford labs. And before that covariants, but they haven't kept up with cov-spectrum's development. All of it's very simple from a modelling perspective, but applying the gisaid data to the case data is massively enlightening.
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12/8 Variant Graph Update
Though they update even more infrequently, I really like the new Bedford labs graphs. These make it very clear just how complicated trying to model the next several months would be.
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Sequencing Update - Weekend Edition
For a national perspective you can see Trevor Bedford’s GitHub. https://github.com/blab/rt-from-frequency-dynamics/tree/master/results/pango-countries
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Japan's daily COVID-19 cases rise week-on-week for 17 straight days | NHK WORLD-JAPAN News
Bedford labs splits it up into specific case counts, and shows the same thing. Here we see that BA.5 cases just stopped declining and started rising. Unfortunately they update irregularly. I'm looking specifically at the third graph here, and what makes me not want to be certain is the dark gray dots that are rising rapidly at the right. These aren't on the legend but I believe mean "other".
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October 19 2022 4 PM CDPHE Update
Bedford labs this week has added several new graphs. This looks in detail at just the US at a lot of different lineages. This looks at many countries with fewer lineages. Note that they do not have XBB.1 (everything's grouped as XBB giving variable results) and their updates are very irregular.
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October 14 2022 4 PM CDPHE Update
4 Bedford labs variant tracker is following XBB now, but not XBB.1. This isn't very useful to see growth in many countries where XBB has been spreading for a bit and XBB.1 has just been introduced, though the r~0.19 (3.8-fold weekly growth) is probably pretty accurate for Singapore.
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The level of coronavirus in Eastern Mass. waste water just shot up
covariants, cov-spectrum, outbreak.info, blab
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The Omicron SARS-CoV-2 variant is more transmissible and less fatal than seasonal influenza
But my best source, when it's updated, is Bedford labs variant tracking project.
coronavirus-dashboard
- What do we think of the new video from Russell?
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So are we all just sick rn??
Seems haven't peaked yet: https://coronavirus.data.gov.uk/. GP wasn't even interested whether its cold vs. covid for me, tested with kit myself. So assuming data is super inaccurate right now except maybe for severe admissions.
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Anyone know if Covid is still a thing in the capital?
It's still a thing, though you only get tested if you're seriously ill in hospital or stockpiled the free tests.
- Hospitalizations the lowest they have been in 2 years
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Immunologist Akiko Iwasaki: ‘We are not done with Covid, not even close’
Can’t speak to the long term damage, but in regards to the number of infections maybe because it’s a new virus in the world? Data suggests it’s trending down from what I can tell (I’m not a healthcare professional). 2,268 patients admitted in last 7 days. https://coronavirus.data.gov.uk/
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Now that Bill Gates has cashed out his COVID vaccine stock for over $500 million he is now claiming that COVID vaccines are problematic. Jimmy Dore calls him out on his new venture. It’s not about health or science. It’s about profit.
The UK has had 473 COVID deaths in only the last 7 days you stupid fuck 🤡🤡🤡 Source: https://coronavirus.data.gov.uk/
- COVID-19 is a leading cause of death in children and young people in the United States
- VIC weekly update: 3,446 new cases and 149 new deaths; weekly average of 226 in hospital and 13 in ICU; R_eff = 0.78 ± 0.12; caseload = 420 ± 100 cases per day (27-January-2023)
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Today's Comments (2023-01-22)
The official data https://coronavirus.data.gov.uk/ showed only 15749 positive tests in the seven days to 14 Jan (who still tests and why?)
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Proudboy leader and Covid denialist has claimed his HermanCain Award! FAFO
source
What are some alternatives?
CovidColoradoCharts - Charts from Colorado's COVID data
shc-extractor - Extract the JSON payload from SHC QR codes (i.e Québec Covid Vaccination QR Codes)
pango-designation - Repository for suggesting new lineages that should be added to the current scheme
covid-19-excess-deaths-tracker - Source code and data for The Economist's covid-19 excess deaths tracker
2020-rki-impf-archive
dupeguru - Find duplicate files
COVID-19-Dashboard - Dieses Scriptable-Skript erzeugt ein Widget, das den Verlauf der 7-Tage-Inzidenz und die Auslastung der Intensivbetten am aktuellen Standort anzeigt. Zusätzlich angezeigt wird der aktuelle Wert der 7-Tage-Inzidenz des zugehörigen Bundeslandes und der Impfstatus des Bundeslandes.
govuk-puppet - Decommissioned: Puppet manifests that used to provision the legacy GOV.UK stack.
exposure-notifications-server - Exposure Notification Reference Server | Covid-19 Exposure Notifications
covid-19-the-economist-global-excess-deaths-model - The Economist's model to estimate excess deaths to the covid-19 pandemic
covasim - COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions
nl-covid19-coronacheck-app-ios