pangoLEARN
Store of the trained model for pangolin to access. (by cov-lineages)
pango-designation
Repository for suggesting new lineages that should be added to the current scheme (by cov-lineages)
pangoLEARN | pango-designation | |
---|---|---|
1 | 209 | |
52 | 1,028 | |
- | 0.5% | |
0.0 | 0.0 | |
over 1 year ago | 3 days ago | |
PureBasic | Jupyter Notebook | |
GNU General Public License v3.0 only | GNU General Public License v3.0 or later |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
pangoLEARN
Posts with mentions or reviews of pangoLEARN.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-10-15.
-
‘Lurching Between Crisis and Complacency’: Was This Our Last Covid Surge?
The sequence classifier is discussed at https://github.com/cov-lineages/pangoLEARN. I mostly check this project to see when outbreak.info or cov-spectrum get updated. FYI the pangoLEARN classifier is currently struggling to get the Delta sublineages correct; that’s a reason why the cov-spectrum lineage wildcards are helpful.
pango-designation
Posts with mentions or reviews of pango-designation.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-10-15.
- Sequencing and Variants Update - [Dec 01, 2023]
- Sequencing and Variants Update - [Nov. 24, 2023]
- Sequencing and Variants Update - [Oct. 06]
- Sequencing and Variants Update - [Sep 29, 2023]
- Sequencing and Variants Update - [Sep. 15, 2023]
- Sequencing and Variants Update - [Sep. 08, 2023]
-
Daily Notes - August 14, 2023
And don't miss this news as well as the link that goes to the discussion.
- Sequences and Variants Update - [July 28th]
What are some alternatives?
When comparing pangoLEARN and pango-designation you can also consider the following projects:
pangolin - Software package for assigning SARS-CoV-2 genome sequences to global lineages.
nitter - Alternative Twitter front-end
CovidColoradoCharts - Charts from Colorado's COVID data
covid-19-excess-deaths-tracker - Source code and data for The Economist's covid-19 excess deaths tracker
privacy-redirect - A simple web extension that redirects Twitter, YouTube, Instagram & Google Maps requests to privacy friendly alternatives.
rt-from-frequency-dynamics
SARS-CoV-2_variant-reports - Informal summaries of notable SARS-CoV-2 lineages