pagoda2
kana
pagoda2 | kana | |
---|---|---|
2 | 2 | |
191 | 3 | |
2.1% | - | |
5.3 | 1.7 | |
2 months ago | about 1 year ago | |
JavaScript | JavaScript | |
- | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
pagoda2
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GOterm analysis in Seurat
Try pagoda2 for this: https://github.com/kharchenkolab/pagoda2
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Seurat Vs Pagoda2 For Scrnaseq Analysis
I realize that this is a bit old, but I find pagoda2 faster: https://github.com/kharchenkolab/pagoda2
kana
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Ask HN: What weird technical scene are you fond/part of?
usig modern web technologies to develop high performance scientific applications. We built a highly optimized, interactive and exploratory application for single-cell data analysis[1]. it runs purely in the browser with no backend and scales upto 200K cells. similar efforts include the biowasm project [2].
[1] https://github.com/jkanche/kana
- Kana: Single Cell RNA-Sequencing Analysis in the Browser
What are some alternatives?
seurat - R toolkit for single cell genomics
SVM-Face-and-Object-Detection-Shader - SVM using HOG descriptors implemented in fragment shaders
scanpy - Single-cell analysis in Python. Scales to >1M cells.
FreePSXBoot - Exploit to allow loading arbitrary code on the PSX using only a memory card (no game needed)
alevin-fry - 🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
AdGuardMV3 - AdGuard browser extension prototype based on the new Manifest V3
too-many-cells - Cluster single cells and analyze cell clade relationships with colorful visualizations.
new-wave - Stack Computer Bytecode Interpreters: The New Wave
TablaM - The practical relational programing language for data-oriented applications
example-chrome-extension - Example Chrome Extension - open source examples for Chrome extension APIs
model-synthesis - Model synthesis is a technique for generating 2D and 3D shapes from examples.
sandspiel - Creative cellular automata browser game