numexpr
Apache Arrow
numexpr | Apache Arrow | |
---|---|---|
4 | 75 | |
2,143 | 13,562 | |
0.7% | 1.4% | |
8.2 | 10.0 | |
about 1 month ago | 4 days ago | |
Python | C++ | |
MIT License | Apache License 2.0 |
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numexpr
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Making Python 100x faster with less than 100 lines of Rust
You can just slap numexpr on top of it to compile this line on the fly.
https://github.com/pydata/numexpr
- Extending Python with Rust
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[D] How to avoid CPU bottlenecking in PyTorch - training slowed by augmentations and data loading?
Are you doing any costly chained NumPy operations in your preprocessing? E.g. max(abs(large_ary)), this produces multiple copies of your data, https://github.com/pydata/numexpr can greatly reduce time spent with such operations
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Selection in pandas using query
What is not entirely obvious here is that under the hood you can install a nice library called numexpr (docs, src) that exists to make calculations with large NumPy (and pandas) objects potentially much faster. When you use query or eval, this expression is passed into numexpr and optimized using its bag of tricks. Expected performance improvement can be between .95x and up to 20x, with average performance around 3-4x for typical use cases. You can read details in the docs, but essentially numexpr takes vectorized operations and makes them work in chunks that optimize for cache and CPU branch prediction. If your arrays are really large, your cache will not be hit as often. If you break your large arrays into very small pieces, your CPU won’t be as efficient.
Apache Arrow
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How moving from Pandas to Polars made me write better code without writing better code
In comes Polars: a brand new dataframe library, or how the author Ritchie Vink describes it... a query engine with a dataframe frontend. Polars is built on top of the Arrow memory format and is written in Rust, which is a modern performant and memory-safe systems programming language similar to C/C++.
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From slow to SIMD: A Go optimization story
I learned yesterday about GoLang's assembler https://go.dev/doc/asm - after browsing how arrow is implemented for different languages (my experience is mainly C/C++) - https://github.com/apache/arrow/tree/main/go/arrow/math - there are bunch of .S ("asm" files) and I'm still not able to comprehend how these work exactly (I guess it'll take more reading) - it seems very peculiar.
The last time I've used inlined assembly was back in Turbo/Borland Pascal, then bit in Visual Studio (32-bit), until they got disabled. Then did very little gcc with their more strict specification (while the former you had to know how the ABI worked, the latter too - but it was specced out).
Anyway - I wasn't expecting to find this in "Go" :) But I guess you can always start with .go code then produce assembly (-S) then optimize it, or find/hire someone to do it.
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Time Series Analysis with Polars
One is related to the heritage of being built around the NumPy library, which is great for processing numerical data, but becomes an issue as soon as the data is anything else. Pandas 2.0 has started to bring in Arrow, but it's not yet the standard (you have to opt-in and according to the developers it's going to stay that way for the foreseeable future). Also, pandas's Arrow-based features are not yet entirely on par with its NumPy-based features. Polars was built around Arrow from the get go. This makes it very powerful when it comes to exchanging data with other languages and reducing the number of in-memory copying operations, thus leading to better performance.
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TXR Lisp
IMO a good first step would be to use the txr FFI to write a library for Apache arrow: https://arrow.apache.org/
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3D desktop Game Engine scriptable in Python
https://www.reddit.com/r/O3DE/comments/rdvxhx/why_python/ :
> Python is used for scripting the editor only, not in-game behaviors.
> For implementing entity behaviors the only out of box ways are C++, ScriptCanvas (visual scripting) or Lua. Python is currently not available for implementing game logic.
C++, Lua, and Python all implement CFFI (C Foreign Function Interface) for remote function and method calls.
"Using CFFI for embedding" https://cffi.readthedocs.io/en/latest/embedding.html :
> You can use CFFI to generate C code which exports the API of your choice to any C application that wants to link with this C code. This API, which you define yourself, ends up as the API of a .so/.dll/.dylib library—or you can statically link it within a larger application.
Apache Arrow already supports C, C++, Python, Rust, Go and has C GLib support Lua:
https://github.com/apache/arrow/tree/main/c_glib/example/lua :
> Arrow Lua example: All example codes use LGI to use Arrow GLib based bindings
pyarrow.from_numpy_dtype:
- Show HN: Udsv.js – A faster CSV parser in 5KB (min)
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Interacting with Amazon S3 using AWS Data Wrangler (awswrangler) SDK for Pandas: A Comprehensive Guide
AWS Data Wrangler is a Python library that simplifies the process of interacting with various AWS services, built on top of some useful data tools and open-source projects such as Pandas, Apache Arrow and Boto3. It offers streamlined functions to connect to, retrieve, transform, and load data from AWS services, with a strong focus on Amazon S3.
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Cap'n Proto 1.0
Worker should really adopt Apache Arrow, which has a much bigger ecosystem.
https://github.com/apache/arrow
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C++ Jobs - Q3 2023
Apache Arrow
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Wheel fails for pyarrow installation
I am aware of the fact that there are other posts about this issue but none of the ideas to solve it worked for me or sometimes none were found. The issue was discussed in the wheel git hub last December and seems to be solved but then it seems like I'm installing the wrong version? I simply used pip3 install pyarrow, is that wrong?
What are some alternatives?
pytorch-lightning - Build high-performance AI models with PyTorch Lightning (organized PyTorch). Deploy models with Lightning Apps (organized Python to build end-to-end ML systems). [Moved to: https://github.com/Lightning-AI/lightning]
Airflow - Apache Airflow - A platform to programmatically author, schedule, and monitor workflows
pygfx - A python render engine running on wgpu.
h5py - HDF5 for Python -- The h5py package is a Pythonic interface to the HDF5 binary data format.
greptimedb - An open-source, cloud-native, distributed time-series database with PromQL/SQL/Python supported. Available on GreptimeCloud.
Apache Spark - Apache Spark - A unified analytics engine for large-scale data processing
jnumpy - Writing Python C extensions in Julia within 5 minutes.
FlatBuffers - FlatBuffers: Memory Efficient Serialization Library
jsmpeg - MPEG1 Video Decoder in JavaScript
polars - Dataframes powered by a multithreaded, vectorized query engine, written in Rust
poly-match - Source for the "Making Python 100x faster with less than 100 lines of Rust" blog post
ClickHouse - ClickHouse® is a free analytics DBMS for big data