graalvm-ten-things VS gwas2vcf

Compare graalvm-ten-things vs gwas2vcf and see what are their differences.

graalvm-ten-things

Top 10 Things To Do With GraalVM (by graalvm)
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Source Code
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gwas2vcf

Convert GWAS summary statistics to VCF (by MRCIEU)
Gwas Bioinformatics Vcf Converter summary-statistics
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graalvm-ten-things gwas2vcf
1 1
230 39
0.0% -
0.0 0.0
over 4 years ago about 1 year ago
C Python
Apache License 2.0 MIT License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

graalvm-ten-things

Posts with mentions or reviews of graalvm-ten-things. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-09-01.

gwas2vcf

Posts with mentions or reviews of gwas2vcf. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2021-09-01.
  • Nuitka: An extremely compatible Python compiler
    10 projects | news.ycombinator.com | 1 Sep 2021
    Here is the original repo I have tried to speed up using:

    python -m nuitka --clang --follow-imports main.py

    repo: https://github.com/MRCIEU/gwas2vcf

    If someone can make the program run faster by whatever means, it will make a bunch of people quite happy.

What are some alternatives?

When comparing graalvm-ten-things and gwas2vcf you can also consider the following projects:

quickjs - Public repository of the QuickJS Javascript Engine.

TileDB-VCF - Efficient variant-call data storage and retrieval library using the TileDB storage library.

Nuitka - Nuitka is a Python compiler written in Python. It's fully compatible with Python 2.6, 2.7, 3.4, 3.5, 3.6, 3.7, 3.8, 3.9, 3.10, and 3.11. You feed it your Python app, it does a lot of clever things, and spits out an executable or extension module.

truvari - Structural variant toolkit for VCFs

pybenchmarks - Python Interpreters Benchmarks

py2many - Transpiler of Python to many other languages

sgkit - We've moved to https://github.com/sgkit-dev/sgkit

Hail - Cloud-native genomic dataframes and batch computing

graalvm-ten-things vs quickjs gwas2vcf vs TileDB-VCF graalvm-ten-things vs Nuitka gwas2vcf vs truvari graalvm-ten-things vs pybenchmarks gwas2vcf vs pybenchmarks graalvm-ten-things vs py2many gwas2vcf vs sgkit gwas2vcf vs Hail gwas2vcf vs py2many gwas2vcf vs Nuitka