gemelli
Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets. (by biocore)
pwndbg
Exploit Development and Reverse Engineering with GDB Made Easy (by pwndbg)
gemelli | pwndbg | |
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2 | 9 | |
65 | 6,785 | |
- | 2.6% | |
7.0 | 9.5 | |
22 days ago | 3 days ago | |
Python | Python | |
BSD 3-clause "New" or "Revised" License | MIT License |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
gemelli
Posts with mentions or reviews of gemelli.
We have used some of these posts to build our list of alternatives
and similar projects.
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What's going on with the widespread use of the log(X + 1) transform for NGS data?
You might want to look into the robust CLR in gemelli and the associated papers. Basically, it only does the CLR on the cells with values, then does sparse matrix completion ML (a la recommendation engines) to fill in the nulls. The devil is in the details of the ML algorithm, but at least it’s not deep learning. I do get pretty nice plots and correlations from the output distance matrices, so there is that.
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Understanding why CLR followed by correlation is not compositionally-valid
You might want to look into Gemelli for something that tries to thread that needle.
pwndbg
Posts with mentions or reviews of pwndbg.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-01-21.
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Any tips for newish C debugging please.
By far the best debugger for C is gdb+pwndbg (https://github.com/pwndbg/pwndbg)
- Need help installing pwndbg on Kali Linux
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Hacked GDB Dashboard Puts It All on Display
There are a lot of these types of tools already in the reverse engineering community (in order of lowest chance of breaking when you throw really weird stuff at it):
GEF: https://gef.readthedocs.io/en/master/
PWNDBG: https://github.com/pwndbg/pwndbg
PEDA: https://github.com/longld/peda
They also come with a slew of different features to aid in RE/exploit dev, but many of them are also useful for debugging really weird issues.
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Debugging with GDB
GDB is great. I definitely recommend checking out watchpoints as well, a very useful tool for monitoring how a variable changes over time.
GDB also has many good plugins - pwndbg has tons of features and UI improvements over stock GDB.
https://github.com/pwndbg/pwndbg
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Making GDB Easier: The TUI Interface
I've recently started a new semester for my Master's program, and the first project for the semester involves using the GDB tool (GNU Debugger) to analyze a stack on a simple C program that contains a buffer overflow vulnerability. A couple of semesters ago, I had been given a VM pre-loaded with a more featured debugger tool called pwndbg. Pwndbg was excellent because it was easy to use and easily allowed accessed to information such as current assembly code being executed and a view of the program registers. So, going back to using GDB felt a little like stepping back into the stone age.
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Awesome CTF : Top Learning Resource Labs
Pwndbg - A GDB plugin that provides a suite of utilities to hack around GDB easily.
- Trouble downloading pwndbg
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Problem in downloading pwndbg
i have peda installed on my gdb and now i am trying to install pwndbg with git clone https://github.com/pwndbg/pwndbg cd pwndbg ./setup.sh