cd4-histone-paper-code
demystify
cd4-histone-paper-code | demystify | |
---|---|---|
1 | 1 | |
2 | 7 | |
- | - | |
10.0 | 3.7 | |
about 8 years ago | 2 months ago | |
R | Python | |
- | Mozilla Public License 2.0 |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
cd4-histone-paper-code
-
Ask HN: Should I publish my research code?
FWIW, this is how I've released the crappy barely-working "academic quality" code for a paper in the past:
https://github.com/DarwinAwardWinner/cd4-histone-paper-code
The main points are that I made only a minimal attempt to organize it, and I made the state of the code clear in the README. I don't recall anyone complaining about the code or even mentioning it during review. (I also don't recall whether I published the code before or after the paper was accepted.)
demystify
-
Ask HN: Should I publish my research code?
I've posted a huge amount of academic code (I've linked to a small number at the end). I think you should, but it won't help advance your career immediately. However, I still think it's better for science.
What is useful is if you can produce code people can build on and do their own cool stuff with -- then they will cite you. However, getting something to a state where it is tested for all reasonable inputs, has some basic docs, etc. is a hard untaking.
https://github.com/minion/minion (C++ constraint solver)
https://github.com/stacs-cp/demystify (Python puzzle solver)
https://github.com/peal/vole (Rust group theory solver)
What are some alternatives?
superconductor - A tool to simulate superconducting circuits, comparable to SPICE.
pyview - pyview contains all reusable and generic classes and functions that I used in my qubit data acquisition setup during my PhD thesis.
crux - Software toolkit for molecular phylogenetic inference
3d-reorganization-prostate-canc
3d-reorganization-prostate-cancer - Code, analysis, and results for Hawley, Zhou, et al., Cancer Research, 2021.
python-qubit-setup - All scripts for controlling the instruments and acquiring data in our qubit setup.