annoy VS faiss

The focus on the top 10 in vector search is a product of wanting to prove value over keyword search. Keyword search is going to miss some conceptual matches. You can try to work around that with tokenization and complex queries with all variations but it's not easy.

Vector search isn't all that new a concept. For example, the annoy library (https://github.com/spotify/annoy) has been around since 2014. It was one of the first open source approximate nearest neighbor libraries. Recommendations have always been a good use case for vector similarity.

Recommendations are a natural extension of search and transformers models made building the vectors for natural language possible. To prove the worth of vector search over keyword search, the focus was always on showing how the top N matches include results not possible with keyword search.

In 2023, there has been a shift towards acknowledging keyword search also has value and that a combination of vector + keyword search (aka hybrid search) operates in the sweet spot. Once again this is validated through the same benchmarks which focus on the top 10.

On top of all this, there is also the reality that the vector database space is very crowded and some want to use their performance benchmarks for marketing.

Disclaimer: I am the author of txtai (https://github.com/neuml/txtai), an open source embeddings database

If you want to go larger you could still use some simple setup in conjunction with faiss, annoy or hnsw.

I then use annoy to compare them. Annoy can use different measures for distance, like cosine, euclidean and more

Yes you can do this for equality predicates if your row groups are sorted . This blog post (that I didn't write) might add more color. You can't do this for any kind of text searching. If you need to do this with file based storage I'd recommend using a vector based text search and utilize a ANN index library like Annoy.

If you need large scale (1000+ dimension, millions+ source points, >1000 queries per second) and accept imperfect results / approximate nearest neighbors, then other people have already mentioned some of the best libraries (FAISS, Annoy).

Would be possible to further speed up the process with using something like ANNOY? https://github.com/spotify/annoy

I like Faiss but I tried Spotify's annoy[1] for a recent project and was pretty impressed.

Since lots of people don't seem to understand how useful these embedding libraries are here's an example. I built a thing that indexes bouldering and climbing competition videos, then builds an embedding of the climber's body position per frame. I then can automatically match different climbers on the same problem.

It works pretty well. Since the body positions are 3D it works reasonably well across camera angles.

The biggest problem is getting the embedding right. I simplified it a lot above because I actually need to embed the problem shape itself because otherwise it matches too well: you get frames of people in identical positions but on different problems!

[1] https://github.com/spotify/annoy

If you just want quick in memory search then pynndescent is a decent option: it's easy to install, and easy to get running. Another good option is Annoy; it's just as easy to install and get running with python, but it is a little less performant if you want to do a lot of queries, or get a knn-graph quickly.

Or just use FAISS https://github.com/facebookresearch/faiss

You can try txtai (https://github.com/neuml/txtai) with a Faiss backend.

This Faiss wiki article might help (https://github.com/facebookresearch/faiss/wiki/Indexing-1G-v...).

For example, a partial Faiss configuration with 4-bit PQ quantization and only using 5% of the data to train an IVF index is shown below.

faiss={"components": "IVF,PQ384x4fs", "sample": 0.05}

If you want to experiment with vector stores, you can do that locally with something like faiss which has good platform support: https://github.com/facebookresearch/faiss

Doing full retrieval-augmented generation (RAG) and getting LLMs to interpret the results has more steps but you get a lot of flexibility, and there's no standard best-practice. When you use a vector DB you get the most similar texts back (or an index integer in the case of faiss), you then feed those to an LLM like a normal prompt.

The codifer for the RAG workflow is LangChain, but their demo is substantially more complex and harder-to-use than even a homegrown implementation: https://news.ycombinator.com/item?id=36725982

According to this documentation page, faiss-gpu is only supported on Linux, not on Windows.

Indexes for vector databases in high dimensions are nowhere near are effective as the 2-d indexes used in GIS or the 1-d B-tree indexes that are commonly used in databases.

Back around 2005 I was interested in similarity search and read a lot of conference proceedings on the top and was basically depressed at the state of vector database indexes and felt that at least for the systems I was prototyping I was OK with a full scan and later in 2013 I had the assignment of getting a search engine for patents using vector embeddings in front of customers and we got performance we found acceptable with full scan.

My impression today is that the scene is not too different than it was in 2005 but I can't say I haven't missed anything. That is, you have tradeoffs between faster algorithms that miss some results and slower algorithms that are more correct.

I think it's already a competitive business. You have Pinecone which had the good fortune of starting before the gold rush. Many established databases are adding vector extension. I know so many engineering managers who love postgresql and they're just going to load a vector extension and go. My RSS reader YOShInOn uses SBERT embeddings to cluster and classify text and certainly More Like This and semantic search are on the agenda, I'd expect it to take about an hour to get

https://github.com/facebookresearch/faiss

up and working, I could spend more time stuck on some "little" front end problem like getting something to look right in Bootstrap than it would take to get working.

I can totally believe somebody could make a better vector db than what's out there but will it be better enough? A startup going through YC now could spend 2-3 to get a really good product and find customers and that is forever in a world where everybody wants to build AI applications right now.

As the size of the codebase grows, storing and searching through embeddings in memory becomes inefficient. This is where vector databases come into play. Tools like Milvus, Faiss, and others are designed to handle large-scale vector data and provide efficient similarity search capabilities. I've wrtten about how to also use sqlite to store vector embeddings. By integrating a vector database, you can scale your code search tool to handle much larger codebases without compromising on search speed.

But FAISS has their own version ("FastScan") https://github.com/facebookresearch/faiss/wiki/Fast-accumula...

https://github.com/facebookresearch/faiss

Not a model, but I would use this Dense Passage Retrieval for Open Domain QA simply fine-tuning two BERT models, one for questions and one for queries, and then fine-tuning using contrastive loss between positive key/value pairs of document embeddings (the [CLS]) token. You can then use a vector database (Like Faiss, Elasticsearch, Vespa or similar) for querying the question.