alphafold2
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released (by lucidrains)
einshape
By google-deepmind
Our great sponsors
| alphafold2 | einshape | |
|---|---|---|
| 1 | 1 | |
| 1,501 | 90 | |
| - | - | |
| 0.0 | 0.0 | |
| over 1 year ago | over 1 year ago | |
| Python | Python | |
| MIT License | Apache License 2.0 |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
alphafold2
Posts with mentions or reviews of alphafold2.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-04-09.
-
A basic introduction to NumPy's einsum
* Example: https://github.com/lucidrains/alphafold2/blob/d59cb1ea536bc5...
einshape
Posts with mentions or reviews of einshape.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-04-09.
-
A basic introduction to NumPy's einsum
Einops looks nice! It reminds me of https://github.com/deepmind/einshape which is another attempt at unifying reshape, squeeze, expand_dims, transpose, tile, flatten, etc under an einsum-inspired DSL.
What are some alternatives?
When comparing alphafold2 and einshape you can also consider the following projects:
array - C++ multidimensional arrays in the spirit of the STL
einops - Flexible and powerful tensor operations for readable and reliable code (for pytorch, jax, TF and others)
cadabra2 - A field-theory motivated approach to computer algebra.
einsum - Einstein Summation for Arrays in R
Einsum.jl - Einstein summation notation in Julia
slot-attention - Implementation of Slot Attention from GoogleAI
Tullio.jl - ⅀
NumPy - The fundamental package for scientific computing with Python.
prtm - Deep learning for protein science