alphafold
TheAlgorithms
alphafold | TheAlgorithms | |
---|---|---|
35 | 61 | |
11,683 | 179,554 | |
1.0% | 1.4% | |
6.4 | 9.7 | |
8 days ago | 6 days ago | |
Python | Python | |
Apache License 2.0 | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
alphafold
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What is a recent scientific discovery that you find exciting?
For all you programmer types, these are the repos for each of them. AlphaFold - ProGen - ProtGPT2
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RFdiffusion: Diffusion model generates protein backbones
2. https://github.com/deepmind/alphafold
- GitHub - deepmind/alphafold: Open source code for AlphaFold.
- New Code Update to AlphaFold 2.0 (links in comments)
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What happened in tech in 2022
b. But seriously, AlphaFold2 dramatically improved the ability to predict protein structures. If you want to read a lot more about it go here or check out the code at https://github.com/deepmind/alphafold
- New Update To AlphaFold 2 (links in comments)
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The anti-vaccine movement and pro-Russian propaganda in social media – a summary report. Since the beginning of the war in Ukraine, there has been a trend in which anti-vaccine accounts have been changing their narrative towards supporting Kremlin propaganda.
If you’re asking about the literal actual sequence of mRNA in the various vaccines, that’s available online, and you can check that it makes the correct shape using a tool like AlphaFold
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Stability AI backs effort to bring machine learning to biomed
Their code/weights/everything.
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Nvida tool kit?
looks like the container uses GPUs for compute https://github.com/deepmind/alphafold
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AlphaFold reveals the structure of the protein universe
> but other famous labs have already moved to ML predictions and are competitive with DeepMind now.
it seems obvious this was going to happen, because https://github.com/deepmind/alphafold
TheAlgorithms
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Wikifunctions
Is it me or does it not seem very well thought out? Every example I've seen only has implementations in JavaScript and/or Python. I haven't seen any other languages nor a way to search by language. What a "string" means in one language can be completely different in another language. The primitive data types that the project assumes are not really supported across all programming languages.
Also if anyone hasn't already seen them, similar projects already exist and are more complete. E.g.
* https://rosettacode.org/
* https://programming-idioms.org/
* https://the-algorithms.com/
Not to mention LeetCode, CodeWars, Project Euler, Exercism can kinda serve the same role.
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Introduction
Hey Everyone, My name is Rachit Chawla and Its my first blog on dev.to. I am currently a student of Computer Programming and Analysis at Seneca College. Also I'm currently on my co-op term working as an Automation Developer at Ontario Public Service. In this role, I am currently working with PowerShell scripting and Microsoft Azure for automating every manual tasks to reduce workload and increase efficiency. This blog is a part of OSD600 course at Seneca College. I am taking this course as I am big fan of open source and always wanted to contribute in open source projects but I am unaware of proper documentation and standards used for open source contributions. I am hoping to learn all the required stuff by the end of this course and I aim to be one of the 15k contributors to Linux's repo by Linus Torvald. Open Source interests me because it gives developers the power to customise the application they want to use, also a chance to help others and improve their skills. I found https://github.com/TheAlgorithms/Python interesting from the Monthly trending feed on Github as it has all the algorithms which help us improve time complexity and write better codes. I has about 1000 contributors which helped to code all the algorithms in Python which may help others for working or learning purposes. I myself was a student of Data Structures and Algorithms in Python Winter 2023 and hoping to even able to contribute to this repo itself, once I learn more about documentation & proper standards to be followed.
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I am studying my college Python so can I learn algorithms from it?
The Algorithms Contains many open source implementations of algorithms. Check it out.
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Where To Read About Python Algos?
If you want to see implementations of all possible traversal algorithms you can find it here.
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Book of pythonic code
The mother load of all algorithms in python is here. dfs/bfs in particular are in the graph section.
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Any tips to improve my coding abilites ?
There is no one way to learn all these but here are some resources: 1. Gooking algorithms [https://edu.anarcho-copy.org/Algorithm/grokking-algorithms-illustrated-programmers-curious.pdf\] 2. Algorithms in all languages [https://the-algorithms.com/] 3. Node js best practices. [https://github.com/goldbergyoni/nodebestpractices] 4. Refactoring [https://refactoring.guru/] 5. Learn about Clean Code and Clean Architecture from uncle bob. https://www.youtube.com/watch?v=NeXQEJNWO5w&ab_channel=StreamAConStreamingConferences
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Self taught developers: where are you in your journey?
DSA basics
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Algo and data structures
I would recommend The Algorithms, it comes with descriptions and examples in multiple programming languages.
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A site that hosts implementations of various programming algorithms in different languages
There's also The Algorithms. Many implementations are unfortunately low quality. The Lua ones (disclaimer: I wrote them) should be fine however.
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How worried are you about AI taking over music?
Python 940 contributors 152k stars
What are some alternatives?
RoseTTAFold - This package contains deep learning models and related scripts for RoseTTAFold
new-world-fishing-bot - user friendly python script who is able to catch fish in the game New World
tensorflow - An Open Source Machine Learning Framework for Everyone
python-ds - No non-sense and no BS repo for how data structure code should be in Python - simple and elegant.
gym - A toolkit for developing and comparing reinforcement learning algorithms.
python-patterns - A collection of design patterns/idioms in Python
Visual Studio Code - Visual Studio Code
algorithms
RFdiffusion - Code for running RFdiffusion
more-itertools - More routines for operating on iterables, beyond itertools
online-go.com - Source code for the Online-Go.com web interface
ClointFusion - Cloint India Pvt. Ltd's (ClointFusion) Pythonic RPA (Automation) Platform