SciencePlots
plotnine
SciencePlots | plotnine | |
---|---|---|
8 | 36 | |
6,492 | 3,828 | |
- | - | |
5.9 | 9.6 | |
3 months ago | 10 days ago | |
Python | Python | |
MIT License | MIT License |
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SciencePlots
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Lets-Plot: An open-source plotting library by JetBrains
This seems quite similar to plotnine [0], which also provides a grammar of graphics interface for Python. That said, I love ggplot and I can't wait to use this in my research! I hope we can port/re-implement ggthemes, scientificplots [1], and other ggplot libraries for lets-plot.
0: https://plotnine.readthedocs.io/en/stable/
1: https://github.com/garrettj403/SciencePlots
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Resources for data visualization (free & paid) for scientific publications
What is it about matplotlib that you object to? If it’s just the number of commands needed to get it right, you can look at something like https://github.com/garrettj403/SciencePlots that will get you most of the way.
- Matplotlib Styles for Scientific Plotting
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LovelyPlots
I know a lot of academics that do, but wouldn't recommend it personally. Also, there is https://github.com/garrettj403/SciencePlots
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Struggling with Python
Seeing as you're doing bioinformatics, I recommend Juptyer notebooks and pandas if you're not already. The pandas documentation is very extensive which is helpful. I also recommend SciencePlots for publication quality plots.
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Using Python (and matplotlib) for plotting in academia
I have also found SciencePlots. Should I use this in addition to cmcrameri?
- Matplotlib style library for Scientific plots
plotnine
- FLaNK AI Weekly 18 March 2024
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A look at the Mojo language for bioinformatics
To your last point, have you tried plotnine? It's meant to be ggplot2 for python.
https://github.com/has2k1/plotnine
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Mastering Matplotlib: A Step-by-Step Tutorial for Beginners
plotnine - A grammar of graphics for Python based on ggplot2.
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Top 10 growing data visualization libraries in Python in 2023
Github: https://github.com/has2k1/plotnine
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Lets-Plot: An open-source plotting library by JetBrains
This seems quite similar to plotnine [0], which also provides a grammar of graphics interface for Python. That said, I love ggplot and I can't wait to use this in my research! I hope we can port/re-implement ggthemes, scientificplots [1], and other ggplot libraries for lets-plot.
0: https://plotnine.readthedocs.io/en/stable/
1: https://github.com/garrettj403/SciencePlots
- When would you use R instead of Python?
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[P] Easily make complex plots using ChatGPT [open source]
There is [plotnine](https://plotnine.readthedocs.io/en/stable/) which tries to implement ggplot in Python.
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Is R or Python an EASIER option for non-CS/SE grads?
You could use plotnine if you like the grammar of graphics concept: https://plotnine.readthedocs.io/en/stable/
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Every modeler is supposed to be a great Python programmer
> Python doesn’t yet have anything remotely close to ggplot for rapidly making exploratory graphics, for example.
Plug for plotnine (https://plotnine.readthedocs.io/en/stable/). I don't know R but use ggplot indirectly through this library for exploratory data analysis, and comparing the experience to any other python plotting library, I understand why R folks are usually so sad to be using Python.
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Why has nobody ported ggplot to Python?
They have, https://plotnine.readthedocs.io/en/stable/
What are some alternatives?
paperetl - 📄 ⚙️ ETL processes for medical and scientific papers
seaborn - Statistical data visualization in Python
paperai - 📄 🤖 Semantic search and workflows for medical/scientific papers
matplotlib - matplotlib: plotting with Python
dufte - :chart_with_upwards_trend: Minimalistic Matplotlib style
Altair - Declarative statistical visualization library for Python
daltonize - Simulate and correct images for dichromatic color blindness
plotly - The interactive graphing library for Python :sparkles: This project now includes Plotly Express!
sane_tikz - Reconquer the canvas: beautiful Tikz figures without clunky Tikz code
ggplot - ggplot port for python
VSCode-LaTeX-Inkscape - ✍️ A way to integrate LaTeX, VS Code, and Inkscape in macOS
bokeh - Interactive Data Visualization in the browser, from Python