PrimesResult
biofast
| PrimesResult | biofast | |
|---|---|---|
| 6 | 3 | |
| 29 | 175 | |
| - | - | |
| 0.0 | 0.0 | |
| about 2 years ago | over 2 years ago | |
| C | ||
| - | - |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
PrimesResult
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The Sad True
https://github.com/luizsol/PrimesResult People give golang crap for being slower than C. Python is 8.6% of the speed of golang.
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.NET vs Go vs Node
Possible place to start: https://github.com/luizsol/PrimesResult
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Best Lisp dialect?
The Performance of CL is much better than Scheme. One example is here https://github.com/luizsol/PrimesResult. Lisp is 11, Chez scheme implementation is 40
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Why I Use Nim instead of Python for Data Processing
The thing with Python is it's usually pretty easy to optimise quite impressively.
E.g. random example:
Sprinkle some cdef's in your python and suddenly you're faster than c++
https://github.com/luizsol/PrimesResult
https://github.com/PlummersSoftwareLLC/Primes/blob/drag-race...
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Common Lisp still beats Java, Rust, Julia, Dart in 2021 on benchmarks based on phone number encoding from the famous paper "Lisp as an alternative to Java" from 21 years ago
Sure, but never discount compile time code that can work wonders for your performance (which Rust doesn't really fully have) - https://github.com/luizsol/PrimesResult. Zig is so high up in the results precisely (I'd wager) because of compile time semantics.
- The results of the Dave Plummer's Programming Languages Drag Race.
biofast
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Parsing huge files in Python
FYI: the python packages I mentioned earlier can all directly read gzip'd fastq files. See also this repo for examples.
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Does Rust Support Reading in FATSA files?
needletail is rated in the Heng Li benchmark (https://github.com/lh3/biofast/)
- Why I Use Nim instead of Python for Data Processing
What are some alternatives?
sb-simd - A convenient SIMD interface for SBCL.
nimtorch - PyTorch - Python + Nim
scikit-bio - scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
Primes - Prime Number Projects in C#/C++/Python
readfq - Fast multi-line FASTA/Q reader in several programming languages
RecursiveFactorization.jl
viroiddb - A curated database of all available viroid-like RNA sequences
libpython-clj - Python bindings for Clojure
benchmarks - Some benchmarks of different languages