DiffSBDD VS EquiBind

Compare DiffSBDD vs EquiBind and see what are their differences.

DiffSBDD

A Euclidean diffusion model for structure-based drug design. (by arneschneuing)
ddpm drug-design equivariance generative-model graph-neural-networks Machine Learning
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EquiBind

EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein (by HannesStark)
Geometry graph-neural-networks proteins protein-structure drug-discovery molecules equivariance
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DiffSBDD EquiBind
1 2
290 452
- -
4.9 0.0
8 months ago about 1 year ago
Python Python
MIT License MIT License
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DiffSBDD

Posts with mentions or reviews of DiffSBDD. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-11-04.
  • Learn diffusion models with Hugging Face course 🧨
    2 projects | /r/learnmachinelearning | 4 Nov 2022
    I'm referring to recent works like DiffLinker (https://github.com/igashov/DiffLinker) and DiffSBDD (https://github.com/arneschneuing/diffsbdd) which use diffusion to generate new ligands or fragments of molecules. If there's enough interest, we could find space to include these exciting topics in the course :)

EquiBind

Posts with mentions or reviews of EquiBind. We have used some of these posts to build our list of alternatives and similar projects.

What are some alternatives?

When comparing DiffSBDD and EquiBind you can also consider the following projects:

OpenChem - OpenChem: Deep Learning toolkit for Computational Chemistry and Drug Design Research

DiffLinker - DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design

minimal-text-diffusion - A minimal implementation of diffusion models for text generation

pypdb - A Python API for the RCSB Protein Data Bank (PDB)

DeepInteract - A geometric deep learning pipeline for predicting protein interface contacts. (ICLR 2022)

DDPM_inversion - Official pytorch implementation of the paper: "An Edit Friendly DDPM Noise Space: Inversion and Manipulations". CVPR 2024.

equidock_public - EquiDock: geometric deep learning for fast rigid 3D protein-protein docking

DenoisingDiffusionProbabilityModel-ddpm- - This may be the simplest implement of DDPM. You can directly run Main.py to train the UNet on CIFAR-10 dataset and see the amazing process of denoising.

anomaly-detection-resources - Anomaly detection related books, papers, videos, and toolboxes

DiffSBDD vs OpenChem EquiBind vs DiffLinker DiffSBDD vs minimal-text-diffusion EquiBind vs pypdb DiffSBDD vs DiffLinker EquiBind vs DeepInteract DiffSBDD vs DDPM_inversion EquiBind vs equidock_public DiffSBDD vs DenoisingDiffusionProbabilityModel-ddpm- DiffSBDD vs anomaly-detection-resources