AllenSDK
code for reading and processing Allen Institute for Brain Science data (by AllenInstitute)
DeepPurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics) (by kexinhuang12345)
| AllenSDK | DeepPurpose | |
|---|---|---|
| 1 | 1 | |
| 326 | 919 | |
| 0.9% | - | |
| 8.5 | 4.6 | |
| 4 months ago | 7 months ago | |
| Jupyter Notebook | Jupyter Notebook | |
| GNU General Public License v3.0 or later | BSD 3-clause "New" or "Revised" License |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
AllenSDK
Posts with mentions or reviews of AllenSDK.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-05-19.
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I want to learn how to code over the summer. I am a neuroscience major and I think this skill would make more marketable for labs on campus.
This is a good idea. Neuroscience (at least Systems Neuro) is getting to a point where experiments can generate humongous amounts of data and computational skills are really important for processing it. I would highly recommend Python, although R is great for fitting statistical models and a lot of labs still rely on Matlab. Python is fast becoming the standard though (from what I have seen). The Allen Institute releases tons of data and the AllenSDK for working with it is all in Python. https://github.com/AllenInstitute/AllenSDK
DeepPurpose
Posts with mentions or reviews of DeepPurpose.
We have used some of these posts to build our list of alternatives
and similar projects.
What are some alternatives?
When comparing AllenSDK and DeepPurpose you can also consider the following projects:
graphein - Protein Graph Library
awesome-drug-pair-scoring - Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)
virnet - VirNet: A deep attention model for viral reads identification
equidock_public - EquiDock: geometric deep learning for fast rigid 3D protein-protein docking