AMDGPU.jl VS ompi

For myself, I use Julia to write my own software (that is run on AMD supercomputer) on Fedora system, using 6800XT. For my experience, everything worked nicely. To install you need to install rocm-opencl package with dnf, AMD Julia package (AMDGPU.jl), add yourself to video group and you are good to go. Also, Julia's KernelAbstractions.jl is a good to have, when writing portable code.

The Julia package AMDGPU.jl provides a Julia interface for AMD GPU (ROCm) programming. As they say, the package is being developed for Julia 1.7, 1.9 and above, but not 1.8. Therefore I downloaded the Julia binary of version 1.7.3 from the older releases Julia page.

This is exciting news! What's also exciting is that it's not just C++ that can run on this supercomputer; there is also good (currently unofficial) support for programming those GPUs from Julia, via the AMDGPU.jl library (note: I am the author/maintainer of this library). Some of our users have been able to run AMDGPU.jl's testsuite on the Crusher test system (which is an attached testing system with the same hardware configuration as Frontier), as well as their own domain-specific programs that use AMDGPU.jl.

What's nice about programming GPUs in Julia is that you can write code once and execute it on multiple kinds of GPUs, with excellent performance. The KernelAbstractions.jl library makes this possible for compute kernels by acting as a frontend to AMDGPU.jl, CUDA.jl, and soon Metal.jl and oneAPI.jl, allowing a single piece of code to be portable to AMD, NVIDIA, Intel, and Apple GPUs, and also CPUs. Similarly, the GPUArrays.jl library allows the same behavior for idiomatic array operations, and will automatically dispatch calls to BLAS, FFT, RNG, linear solver, and DNN vendor-provided libraries when appropriate.

I'm personally looking forward to helping researchers get their Julia code up and running on Frontier so that we can push scientific computing to the max!

Library link: <https://github.com/JuliaGPU/AMDGPU.jl>

GitHub - JuliaGPU/AMDGPU.jl: AMD GPU (ROCm) programming in Julia

https://github.com/JuliaGPU/AMDGPU.jl

https://github.com/JuliaGPU/oneAPI.jl

These are both less mature than CUDA.jl, but are in active development.

The commercial Linux world (see https://github.com/open-mpi/ompi/issues/4349) and other open source OSes (eg FreeBSD) seem to have lined up behind little-endian PowerPC. IBM still has a big-endian problem with AIX, IBM i, and Linux on Z.

Roughly, the sets of computational problems that people used (use?) MPI for. Things like numerical solvers for sparse matrices that are so big that you need to split them across your entire cluster. These still require a lot of node-to-node communication, and on top of it, the pattern is dependent on each problem (so easy solutions like map-reduce are effectively out). See eg https://www.open-mpi.org/, and https://courses.csail.mit.edu/18.337/2005/book/Lecture_08-Do... for the prototypical use case.

One of the guys at the local LUG is one of the lead maintainers of Open MPI. He told us about a comment that ran into the hundreds of lines, all for a one-line change in the code.

But it would be very inconvenient to have to keep crediting everyone who's ever worked on it. If you look at old projects, their licenses can have like 10-20 of those lines (here's one I was recently looking into).

I have a bit of experience programming for a highly-parallel supercomputer, specifically in my case an IBM BlueGene/Q. In that case, the answer is a lot of message passing (we used Open MPI [0]). Since the nodes are discrete and don't have any shared memory, you end up with something kinda reminiscent of the actor model as popularized by Erlang and co -- but in C for number-crunching performance.

That said, each of the nodes is itself composed of multiple cores with shared memory. So in cases where you really want to grind out performance, you actually end up using message passing to divvy up chunks of work, and then use classic pthreads to parallelize things further, with lower latency.

Debugging is a bit of a nightmare, though, since some bugs inevitably only come up once you have a large number of nodes running the algorithm in parallel. But you'll probably be in a mainframe-style time-sharing setup, so you may have to wait hours or more to rerun things.

This applies less to some of the newer supercomputers, which are more or less clusters of GPUs instead of clusters of CPUs. I imagine there's some commonality, but I haven't worked with any of them so I can't really say.

[0] https://www.open-mpi.org/

I would suggest using OpenMPI because it's pretty easy to get started with. You can build OpenMPI with CUDA support, then you can pass device pointers directly to MPI_Send and MPI_Recv. Then you don't have to deal with transfers and synchronization issues.

backends from native torch distributed configuration: nccl, gloo, mpi.

I use a linux ubuntu machine with MPI (https://www.open-mpi.org/). I had a question on making my computer simulations faster. Would be better to get an older AMD 9590 machine clocked at 4.7 ghz or continue using my Ryzen 7 1700 machine clocked at something like 3.5ghz?

OpenMPI - Message passing interface implementation. BSD-3-Clause