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Profiling workflows with the Amazon Genomics CLI
5 projects | dev.to | 26 Apr 2022

To run a workflow with AGC you use commands like the following - in this case I’m running the GATK data processing workflow that is included as an example when you install AGC:

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gatk-workflows/gatk4-data-processing is an open source project licensed under BSD 3-clause "New" or "Revised" License which is an OSI approved license.

The primary programming language of gatk4-data-processing is wdl.