Cellsnp-lite Alternatives
Similar projects and alternatives to cellsnp-lite based on common topics and language
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popscle
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awesome-single-cell
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InfluxDB
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Vcflib
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salmon
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SaaSHub
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cellsnp-lite reviews and mentions
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Genotype single cell data?
Commenting in case anyone else needs a solution: cellSNP-lite took in the bam files and generated variant calls. Can be used with or without a list of SNPs for comparisons, RNA, ATAC, bulk or single cell!
Stats
single-cell-genetics/cellsnp-lite is an open source project licensed under Apache License 2.0 which is an OSI approved license.
The primary programming language of cellsnp-lite is C.
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