Bdg-formats Alternatives
Similar projects and alternatives to bdg-formats
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asdf
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InfluxDB
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adam
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
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WorkOS
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bdg-formats reviews and mentions
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Advanced Scientific Data Format
We presented using Parquet formats for bioinformatics 2012/13-ish at the Bioinformatics Open Source Conference (BOSC) and got laughed out of the place.
While using Apache Spark for bioinformatics [0] never really took off, I still think Parquet formats for bioinformatics [1] is a good idea, especially with DuckDB, Apache Arrow, etc. supporting Parquet out of the box.
0 - https://github.com/bigdatagenomics/adam
1 - https://github.com/bigdatagenomics/bdg-formats
Stats
bigdatagenomics/bdg-formats is an open source project licensed under Apache License 2.0 which is an OSI approved license.
The primary programming language of bdg-formats is Shell.
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