bdg-formats

Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed. (by bigdatagenomics)

Bdg-formats Alternatives

Similar projects and alternatives to bdg-formats

  • asdf

    Extendable version manager with support for Ruby, Node.js, Elixir, Erlang & more

  • asdf

    ASDF (Advanced Scientific Data Format) is a next generation interchange format for scientific data (by asdf-format)

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
  • adam

    ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

  • uvfs

    Microscopic C++20 archive format

  • sito

    sito: A serialization suite

  • WorkOS

    The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.

    WorkOS logo
NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better bdg-formats alternative or higher similarity.

bdg-formats reviews and mentions

Posts with mentions or reviews of bdg-formats. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-09-30.
  • Advanced Scientific Data Format
    6 projects | news.ycombinator.com | 30 Sep 2022
    We presented using Parquet formats for bioinformatics 2012/13-ish at the Bioinformatics Open Source Conference (BOSC) and got laughed out of the place.

    While using Apache Spark for bioinformatics [0] never really took off, I still think Parquet formats for bioinformatics [1] is a good idea, especially with DuckDB, Apache Arrow, etc. supporting Parquet out of the box.

    0 - https://github.com/bigdatagenomics/adam

    1 - https://github.com/bigdatagenomics/bdg-formats

Stats

Basic bdg-formats repo stats
1
38
5.4
4 months ago

bigdatagenomics/bdg-formats is an open source project licensed under Apache License 2.0 which is an OSI approved license.

The primary programming language of bdg-formats is Shell.


Sponsored
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com