Ancient-microbiome-denovo Alternatives
Similar projects and alternatives to ancient-microbiome-denovo
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metaGEM
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better ancient-microbiome-denovo alternative or higher similarity.
ancient-microbiome-denovo reviews and mentions
Posts with mentions or reviews of ancient-microbiome-denovo.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-07-05.
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metaGEM: create your own genome scale metabolic models directly from metagenomes
In our pre-print, we apply metaGEM to samples from small lab cultures, human gut, plant-associated, bulk soil, and ocean metagenomes. Through pangenome analysis and species metabolic interaction analysis, we showed that the workflow generates phenotype-relevant and context-specific models. I have also applied metaGEM to kefir cultures and fossilized human poop with great success!
Stats
Basic ancient-microbiome-denovo repo stats
1
4
0.0
about 3 years ago
The primary programming language of ancient-microbiome-denovo is Shell.
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