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CHM13 Alternatives
Similar projects and alternatives to CHM13
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fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better CHM13 alternative or higher similarity.
CHM13 reviews and mentions
Posts with mentions or reviews of CHM13.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-09-14.
- VCF file for practice
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NHI Genome Studies: Mexico Govt Sept 12 Congressional hearing
2) Use bowtie2 to align reads against CHM13. This will let you separate human from nonhuman (important, as human sequences are a common contaminant in many nonhuman genomes).
- The human Y chromosome has been sequenced
- The human genome is, at long last, complete
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The complete sequence of a human genome
Code https://github.com/marbl/CHM13
- Scientists publish the first complete human genome
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The first fully complete human genome with no gaps is now available to view for scientists and the public, marking a huge moment for human genetics. The six papers are all published in the journal Science.
Liftover files are already available from https://github.com/marbl/CHM13
- Why there is a lot of Ns at the begining of the fasta file of all Human chromosomes
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The Entire Human Genome Has Been Sequenced
If you’re serious, you can download the current fasta file from this page.
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Digital Karyogram Derived From The Telomere-to-Telomere Consortium's CHM13/v1.1 Genome Assembly [OC]
I have created a simulated karyogram based on REPAVER visualisations of the Telomere-to-telomere Consortium's CHM13 assembly:
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A note from our sponsor - SaaSHub
www.saashub.com | 1 May 2024
Stats
Basic CHM13 repo stats
13
865
4.9
about 1 month ago
marbl/CHM13 is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
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