Linux Workstation for Bio-informatics Data Analysis

This page summarizes the projects mentioned and recommended in the original post on /r/bapccanada

InfluxDB - Power Real-Time Data Analytics at Scale
Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
www.influxdata.com
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  • STAR

    RNA-seq aligner

    • I will be using this PC to run Analyses using R studio and Python. For the most part I will be working with genomic sequencing data and other cell data. I will be using different bash software (STAR, FeatureCounts) and other packages in R (Seurat) and Python ((UMAP)[https://umap-learn.readthedocs.io/en/latest/]). I also wanted to try using some other analyses software such as 10x Genomics' CellRanger.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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