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For those RGB LEDs you need to mount them on the underside with a hole in the PCB. The corne-classic uses them if you want a reference design. The v3 corne-cherry uses SK6812MINI-e (with the longer legs).
The folks at keeb.io have a great footprint library on github that has footprints for ski mini and 'dumb' rgb undermount leds too. https://github.com/keebio/Keebio-Parts.pretty
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