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BTT_SKR_13_14_14T_SD-DFU-Bootloader
This is a repository of BIGTREETECH bootloaders. The originals are stored under the bootloader_bin/backed_up_original_bootloaders/ directory. This repository also has a bootloader for the SKR E3 TURBO to fix the high pitch sound coming out of the CR10_STOCKDISPLAY it is located on the bootloder_bin/compiled_bootloader_bin/ directory.
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InfluxDB
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It doesn't sound like an EEPROM fault, because that only affects various settings, not what functions and codes it supports. It sounds like something is wrong with the bootloader, eg it's reading the firmware file but not storing it. If nothing else works, is it worth getting a little STLink in-system programmer and reinstalling the bootloader and firmware completely? There's a link at https://github.com/GadgetAngel/BTT_SKR_13_14_14T_SD-DFU-Bootloader which should be helpful if you want to try that.