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Create a fly.toml file similar to the one in my repo. Make sure to update the appname to a unique name.
Review the environment variables listed in the [env] section and update if required. You can check FreshRSS' docs on the environment variables that can be updated
Fly.io's CLI-oriented approach makes updates via GitHub actions easy. While I haven't set up for FreshRSS, you can look at this PR where I add a GitHub action to deploy my blog, sathyabh.at, a static site powered by Hugo to Fly.io.
FreshRSS is a free, self-hostable RSS feeds aggregator. Fly.io is a super amazing platform that runs application servers close to end users.