mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing (by brentp)
adventofcode2022
Advent of Code 2022 solutions in Nim (by mishankov)
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| mosdepth | adventofcode2022 | |
|---|---|---|
| 3 | 1 | |
| 654 | 3 | |
| - | - | |
| 5.2 | 10.0 | |
| 12 days ago | over 1 year ago | |
| Nim | Nim | |
| MIT License | - |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
mosdepth
Posts with mentions or reviews of mosdepth.
We have used some of these posts to build our list of alternatives
and similar projects.
- Calculating Average Coverage or Read Depth for a Sequence (WES)
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Why is bedtools genomecov giving me a blank output file?
I'm not sure why that happens, but an alternative to bedtools genomecov is mosdepth. Maybe you can try that tool instead as it's very reliable.
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Is there a tool that quantifies “spatial coverage”, that is what percentage of a reference assembly has a read mapped to it?
I would give mosdepth a look. It can provide depth across a chromosome/contig at each base, or a mean depth for a given window size (eg 1kb), or regions provided within a bed file, or a simple summary of the mean depth across each chromosome/contig.
adventofcode2022
Posts with mentions or reviews of adventofcode2022.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-12-01.
-
Hey! Does anybody using Nim to solve this years Advent of Code?
If so, let's share) Mine, although not the most elegant, are here: https://github.com/mishankov/adventofcode2022
What are some alternatives?
When comparing mosdepth and adventofcode2022 you can also consider the following projects:
nimbus-eth1 - Nimbus: an Ethereum Execution Client for Resource-Restricted Devices
AdventOfCode2020 - My solutions for AoC 2020
nim-plotly - plotly wrapper for nim-lang
aoc2022 - advent of code 2022
moe - A command line based editor inspired by Vim. Written in Nim.
aoc-2022
INim - Interactive Nim Shell / REPL / Playground
Unchained - A fully type safe, compile time only units library.
advent-of-code-2021
Neel - A Nim library for making Electron-like HTML/JS GUI apps, with full access to Nim capabilities.
mosdepth vs nimbus-eth1
adventofcode2022 vs AdventOfCode2020
mosdepth vs nim-plotly
adventofcode2022 vs aoc2022
mosdepth vs moe
adventofcode2022 vs aoc-2022
mosdepth vs INim
adventofcode2022 vs INim
mosdepth vs Unchained
adventofcode2022 vs advent-of-code-2021
mosdepth vs Neel
adventofcode2022 vs moe