frackyfrac
scipipe
| frackyfrac | scipipe | |
|---|---|---|
| 1 | 1 | |
| 2 | 1,055 | |
| - | 0.3% | |
| 6.2 | 3.0 | |
| about 2 months ago | 11 months ago | |
| Go | Go | |
| MIT License | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
frackyfrac
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Standalone UniFrac
Hi! I'd like to share with you FrackyFrac, a standalone UniFrac calculator that I've written for myself and colleagues in my department. I hope this implementation is inclusive enough that everyone can use it with ease, regardless of technical background and software availability.
scipipe
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Ask HN: What have you created that deserves a second chance on HN?
https://scipipe.org - A pipeline tool for shell commands by a declarative flow-based API in Go
Github link: https://github.com/scipipe/scipipe
There are many pipeline tools for shell commands, but a majority has one or more limitations in their API which makes certain complex pipelines impossible or really hard to write.
We were pushing the limits of all the tools we tried, so developed our own, and implemented it in Go, with a declarative API for defining the data flow dependencies, instead of inventing yet another DSL. This has allowed us great flexibility in developing also complex pipelines, e.g. combining parameter sweeps nested with cross-validation implemented as workflow constructs.
SciPipe is also unique in providing an audit report for every single output of the workflow, in a structured JSON format. A helper tool allows converting these reports to either an HTML report, a PDF, or a Bash script that will generate the one accompanying output file from scratch.
An extra cool things is that, because the audit reports live alongside output files, if you run a scipipe workflow that uses files generated by another scipipe workflow, it will pick up also all the history for the input files generated by this earlier workflow, meaning that you get a 100% complete audit report, even if your analysis spans multiple workflows!
What are some alternatives?
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quart - An async Python micro framework for building web applications.
rosettaboy - A gameboy emulator in several different languages
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donutdns - Block ads, trackers, and malicious sites with donutdns - simple alternative to pihole. Run as a docker container, standalone executable or core DNS plugin. Supply custom domain block/allow lists in addition to builtin lists maintained by the ad-blocking community.
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