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There used to be JPDB-Deck-Scraper-GUI but it got taken down. The original author has another project https://github.com/hopto-dot/JPDB-Deck-Manager so maybe that might be something similar? I can't tell what it does just by reading it though
You can also make your own word lists if you can find the script on wareya's site in https://learnjapanese.moe/resources/ and run it through his tool https://github.com/wareya/analyzer . I think a decent amount of vns that are on jpdb are sourced from there.
NOTE:
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Hence, a higher number means a more popular project.