zstd.cr
Crystal bindings to the Zstandard (zstd) compression library (by didactic-drunk)
hts.cr
HTSlib bindings for Crystal (by bio-cr)
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
zstd.cr
Posts with mentions or reviews of zstd.cr.
We have used some of these posts to build our list of alternatives
and similar projects.
We haven't tracked posts mentioning zstd.cr yet.
Tracking mentions began in Dec 2020.
hts.cr
Posts with mentions or reviews of hts.cr.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-10-18.
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Show a Tanuki with Samtools!
First, let's make sure that Samtools can be built successfully. Note that the build requires htslib and other dependencies. In my case, I put htslib directory in the same directory as samtools because I build htslib by myself for htslib binding of Crystal language which I make for my personal interest. If you put htslib here, samtools can detect it automatically. htslib requires submodules git submodule update -i --recursive. If you get stuck, please google it. It would be safer to check out a stable tag git checkout 1.16.1, and switch to a new branch git switch tanuki. It is up to you.
What are some alternatives?
When comparing zstd.cr and hts.cr you can also consider the following projects:
xz - Crystal bindings to the xz (lzma) compression library
cyvcf2 - cython + htslib == fast VCF and BCF processing
snappy - Snappy compression format reader/writer for Crystal
sambamba - Tools for working with SAM/BAM data
brotli.cr - Crystal bindings to the Google brotli compression library
bam-filter - Use simple expressions to filter a BAM/CRAM file
polylines.cr - Google Polylines in Crystal!
ruby-htslib - HTSlib bindings for Ruby
Crystar - Crystal language Tar Module implements access to tar archives.
samtools - Tools (written in C using htslib) for manipulating next-generation sequencing data