AGAT
Another Gtf/Gff Analysis Toolkit (by NBISweden)
GAAS
Genome Assembly and Annotation Service code (by NBISweden)
AGAT | GAAS | |
---|---|---|
1 | 1 | |
424 | 196 | |
2.6% | 0.5% | |
7.4 | 2.6 | |
1 day ago | 6 months ago | |
Perl | Perl | |
GNU General Public License v3.0 only | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
AGAT
Posts with mentions or reviews of AGAT.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-02-20.
-
How to download the GTF file for my organism from NCBI? (using featureCounts to obtain gene count data from reads)
There are tools available to convert GFF files to GTF, such as gffread or AGAT.
GAAS
Posts with mentions or reviews of GAAS.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-02-20.
-
How to download the GTF file for my organism from NCBI? (using featureCounts to obtain gene count data from reads)
In fact someone has done a review of the main conversion tools here.
What are some alternatives?
When comparing AGAT and GAAS you can also consider the following projects:
pyGenomeViz - A genome visualization python package for comparative genomics
Utilities - Useful things
imgui - Dear ImGui: Bloat-free Graphical User interface for C++ with minimal dependencies
learn-anything.xyz - Organize world's knowledge, explore connections and curate learning paths
nwn-lib-d - Library & tools for handling Neverwinter Nights 1/2 resources files