Point of using Hisat2 build to index reference genomes when working with known genomes mouse/human?

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics
nf-core nextflow Workflow rna-seq rna

InfluxDB - Power Real-Time Data Analytics at Scale
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  • rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

    • Just run something like this and don’t worry about it: https://nf-co.re/rnaseq

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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