sars-cov-2

Open-source projects categorized as sars-cov-2 Edit details
Language filter: + Python + TypeScript + JavaScript + Makefile + HTML + R + Vue + C++
Related topics: #covid-19 #Coronavirus #Covid19 #Covid #Nextstrain

Top 21 sars-cov-2 Open-Source Projects

  • covid-19-data

    Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data (by owid)

    Project mention: One Small Piece of Covid-19 Data | reddit.com/r/WayOfTheBern | 2022-07-24

    Yes, try this website, I think level of vaccination is the most important datum beside Cuomo-rbidities…

  • covid19_scenarios

    Models of COVID-19 outbreak trajectories and hospital demand

    Project mention: How to buy HEX from ETH? (ethhex has bogus https cert) | reddit.com/r/Pulsechain | 2022-05-04

    Same issue and resolution was found on other sites in the wild: https://github.com/neherlab/covid19_scenarios/issues/516

  • Scout APM

    Less time debugging, more time building. Scout APM allows you to find and fix performance issues with no hassle. Now with error monitoring and external services monitoring, Scout is a developer's best friend when it comes to application development.

  • ncov

    Nextstrain build for novel coronavirus SARS-CoV-2

    Project mention: Coronavirus Datsets | reddit.com/r/datasets | 2022-06-16

    Mutations (thanks /u/Mynewestaccount34578)

  • makair

    🫁 The world's first open-source ventilator tested on human patients. Mass-producible at a low cost (~2000€).

  • seirsplus

    Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

    Project mention: SIERS Modeling Primer: Like Pandemic the Game But With More Math | reddit.com/r/Destiny | 2022-01-15

    Ryan Mcgee's Python SEIRS Model

  • covariants

    Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

    Project mention: Some people are saying the 2nd or 3rd time you get COVID the symptoms are much milder. Some are saying the symptoms their symptoms were not as bad their first time having it. For those who’ve had it more than once, how was your experience? | reddit.com/r/COVID19positive | 2022-07-09

  • COVID-19-Impfungen_in_Deutschland

    Die COVID-19-Impfung kann einen Wendepunkt in der Kontrolle der COVID-19-Pandemie darstellen und erfährt daher hohes Maß an öffentlicher Aufmerksamkeit. Einführung und Umsetzung der COVID-19-Impfung gehen mit besonderen Herausforderungen einher, die bei der Impfdatenerfassung zu berücksichtigen sind. In diesem Kontext ist es Ziel des Projekts 'Digitales Impfquoten-Monitoring' (DIM), tagesaktuell, bundesweit die Impfquote zu erfassen und folgend aufbereitet darzustellen, um zeitnah den Verlauf de

    Project mention: Corona-Megathread KW II - 1 | Hier könnte Ihre Werbung stehen | reddit.com/r/de | 2022-01-12

  • SonarLint

    Clean code begins in your IDE with SonarLint. Up your coding game and discover issues early. SonarLint is a free plugin that helps you find & fix bugs and security issues from the moment you start writing code. Install from your favorite IDE marketplace today.

  • nextclade

    Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

  • social-distancing

    A simple, decentralized. privacy-reserving contact tracing system

  • covid19-eu-data

    Automated Data Collection: COVID-19/SARS-COV-2 Cases in EU by Country, State/Province/Local Authorities, and Date

  • SARS-CoV-2-Nowcasting_und_-R-Schaetzung

    Das Nowcasting erstellt eine Schätzung des Verlaufs der Anzahl von bereits erfolgten SARS-CoV-2-Erkrankungsfällen in Deutschland unter Berücksichtigung des Diagnose-, Melde- und Übermittlungsverzugs. Aufbauend auf dem Nowcasting kann eine Schätzung der zeitabhängigen Reproduktionszahl R durchgeführt werden. Die Reproduktionszahl beschreibt, wie viele Menschen eine infizierte Person im Mittel ansteckt. Sie kann nicht alleine als Maß für Wirksamkeit/Notwendigkeit von Maßnahmen herangezogen werden.

    Project mention: Corona-Megathread KW 48 - I | Für mich soll's volle Booster regnen | reddit.com/r/de | 2021-11-28

  • COVID-19-Hospitalisierungen_in_Deutschland

    Im Datensatz 'COVID-19-Hospitalisierungen' werden die aktuellen Zahlen der nach den Vorgaben des Infektionsschutzgesetzes - IfSG - erfassten hospitalisierten COVID-19-Fälle bereitgestellt. Um den Trend der Anzahl von Hospitalisierungen und der 7-Tage-Hospitalisierungsinzidenz besser bewerten zu können, wird die berichtete Hospitalisierungsinzidenz um eine Schätzung der zu erwartenden Anzahl an verzögert berichteten Hospitalisierungen ergänzt. Neben den Daten der gemeldeten COVID-19-Hospitalisier

    Project mention: Corona Megathread November #1 | reddit.com/r/de | 2021-11-20

  • SARS-CoV-2_Infektionen_in_Deutschland

    Im Datensatz "SARS-CoV-2 Infektionen in Deutschland" werden die tagesaktuellen Fallzahlen, der nach den Vorgaben des Infektionsschutzgesetzes - IfSG - von den Gesundheitsämtern in Deutschland gemeldeten positiven SARS-CoV-2 Infektionen, Todes- und Genesungsfälle bereitgestellt. Gesundheitsämtern in Deutschland gemeldeten positiven SARS-CoV-2 Infektionen, Todes- und Genesungsfälle bereitgestellt.

    Project mention: Verlauf der COVID-19-Pandemie in Deutschland bis 09.12.2021 | reddit.com/r/de | 2021-12-09

  • COVID-19-RNA-Seq-datasets

    A repository for sharing information on available COVID-19 RNA-Seq datasets

    Project mention: What's so special about covid that it needs multiple vaccines and boosters and all these mandates and passports ? | reddit.com/r/conspiracy | 2021-10-30

  • PHES-ODM

    Metadata and code to support covid-19 environmental surveillance for public health. Wastewater-based surveillance for Covid-19, with support for other health risks and environmental settings.

  • jaukerl-ooe

    Overview page for all COVID vaccination appointments in Upper Austria. 💉

    Project mention: Wird in den Impfstrassen in Linz nur noch Biontech/Pfizer verimpft oder gibt es auch noch irgendwo Moderna? | reddit.com/r/Linz | 2022-02-11

    Laut https://jaukerl-ooe.m8.at nur mehr Pfizer Termine.

  • BioExplorer

    The Blue Brain BioExplorer (BBBE) is a tool for scientists to extract and analyze scientific data from visualization and interactive exploration

    Project mention: Blue Brain BioExplorer: A new tool to render complex biological systems | reddit.com/r/neuroscience | 2022-07-26

  • helix-covid19db

    Helix® COVID-19 Surveillance

  • Code-distancing

    Keep your code safe from COVID-19 by staying 6 line breaks apart.

    Project mention: PSA: There are 30+ people in line at Service Canada before it has even opened. It’s like this every day. | reddit.com/r/VictoriaBC | 2021-11-12

  • covid19-eu-data-api

    Clean up data

    Project mention: Corona Srbija API | reddit.com/r/programiranje | 2021-12-15

  • covid-19-api

    A JavaScript library that provides a simple API for the Johns Hopkins University CSSE COVID-19 time series data. (by evrimfeyyaz)

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020). The latest post mention was on 2022-07-26.

sars-cov-2 related posts

Index

What are some of the best open-source sars-cov-2 projects? This list will help you:

Project Stars
1 covid-19-data 5,353
2 covid19_scenarios 1,375
3 ncov 1,295
4 makair 776
5 seirsplus 602
6 covariants 282
7 COVID-19-Impfungen_in_Deutschland 147
8 nextclade 138
9 social-distancing 86
10 covid19-eu-data 79
11 SARS-CoV-2-Nowcasting_und_-R-Schaetzung 78
12 COVID-19-Hospitalisierungen_in_Deutschland 74
13 SARS-CoV-2_Infektionen_in_Deutschland 74
14 COVID-19-RNA-Seq-datasets 66
15 PHES-ODM 39
16 jaukerl-ooe 29
17 BioExplorer 21
18 helix-covid19db 15
19 Code-distancing 7
20 covid19-eu-data-api 6
21 covid-19-api 4
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