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Rust-memchr Alternatives
Similar projects and alternatives to rust-memchr
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regex
An implementation of regular expressions for Rust. This implementation uses finite automata and guarantees linear time matching on all inputs.
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ripgrep
ripgrep recursively searches directories for a regex pattern while respecting your gitignore
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Mergify
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InfluxDB
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StringZilla
Up to 10x faster string search, split, sort, and shuffle for long strings and multi-gigabyte files in Python and C, leveraging SIMD with just a few lines of Arm Neon and x86 AVX2 & AVX-512 intrinsics 🦖
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zig
General-purpose programming language and toolchain for maintaining robust, optimal, and reusable software.
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mscs-thesis-project
Evaluating Languages for Bioinformatics: Performance, Expressiveness and Energy
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fast_strstr
A fast substitution to the stdlib's strstr() sub-string search function.
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scc
Sloc, Cloc and Code: scc is a very fast accurate code counter with complexity calculations and COCOMO estimates written in pure Go
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sliceslice-rs
A fast implementation of single-pattern substring search using SIMD acceleration.
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ILSpy
.NET Decompiler with support for PDB generation, ReadyToRun, Metadata (&more) - cross-platform!
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wasm-bindgen
Facilitating high-level interactions between Wasm modules and JavaScript
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SonarLint
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rust-memchr reviews and mentions
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Stringzilla: Fastest string sort, search, split, and shuffle using SIMD
Copying my feedback from reddit[1], where I discussed it in the context of the `memchr` crate.[2]
I took a quick look at your library implementation and have some notes:
* It doesn't appear to query CPUID, so I imagine the only way it uses AVX2 on x86-64 is if the user compiles with that feature enabled explicitly. (Or uses something like [`x86-64-v3`](https://en.wikipedia.org/wiki/X86-64#Microarchitecture_level...).) The `memchr` crate doesn't need that. It will use AVX2 even if the program isn't compiled with AVX2 enabled so long as the current CPU supports it.
* Your substring routines have multiplicative worst case (that is, `O(m * n)`) running time. The `memchr` crate only uses SIMD for substring search for smallish needles. Otherwise it flips over to Two-Way with a SIMD prefilter. You'll be fine for short needles, but things could go very very badly for longer needles.
* It seems quite likely that your [confirmation step](https://github.com/ashvardanian/Stringzilla/blob/fab854dc4fd...) is going to absolutely kill performance for even semi-frequently occurring candidates. The [`memchr` crate utilizes information from the vector step to limit where and when it calls `memcmp`](https://github.com/BurntSushi/memchr/blob/46620054ff25b16d22...). Your code might do well in cases where matches are very rare. I took a quick peek at your benchmarks and don't see anything that obviously stresses this particular case. For substring search, the `memchr` crate uses a variant of the "[generic SIMD](http://0x80.pl/articles/simd-strfind.html#first-and-last)" algorithm. Basically, it takes two bytes from the needle, looks for positions where those occur and then attempts to check whether that position corresponds to a match. It looks like your technique uses the first 4 bytes. I suspect that might be overkill. (I did try using 3 bytes from the needle and found that it was a bit slower in some cases.) That is, two bytes is usually enough predictive power to lower the false positive rate enough. Of course, one can write pathological inputs that cause either one to do better than the other. (The `memchr` crat benchmark suite has a [collection of pathological inputs](https://github.com/BurntSushi/memchr/blob/46620054ff25b16d22...).)
It would actually be possible to hook Stringzilla up to `memchr`'s benchmark suite if you were interested. :-)
[1]: https://old.reddit.com/r/rust/comments/163ph8r/memchr_26_now...
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Regex Engine Internals as a Library
I actually have an M2 mac mini in the mail from Apple for exactly this purpose.
My time horizon is very long. It takes me a long time to do things these days.
It has never been true that I don't want to support it. Merely that it is difficult to verify and test. There is also the problem that the port from x86 to arm is not straight-forward, do to both my own ignorance and what I believe are important missing vector operations such as movemask.
This is discussed a bit more here (including the bit about movemask): https://github.com/BurntSushi/memchr/issues/76
The current PR for ARM SIMD[1] uses a different instruction mix to achieve the same goals as movemask. I tested the PR and it has a significant speedup over the non-vectorized version.
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Sneller Regex vs Ripgrep
And that is the primary reason why ripgrep doesn't bother with AVX-512. Not because of some lack of skill as this blog suggests:
> Additionally, ripgrep uses AVX2 and does not take advantage of AVX-512 instruction sets, but this can be forgiven given the specialized skills required for handcrafting for SkylakeX and Icelake/Zen4 processors.
Namely, I tried running sneller on my CPU, which is a pretty recent i9-12900K, and not even it supports AVX-512. That's because Intel has been dropping support for AVX-512 from its more recent consumer grade CPUs. ripgrep is running far more frequently on consumer grade CPUs, so supporting AVX-512 is probably not particularly advantageous. At least, it's not obvious to me that it's worth doing. And certainly, the skill argument isn't entirely wrong. I'd have to invest developer time to make it work.
I think there are two other things worth highlighting from this blog.
First is that sneller seems to do quite well with compressed data. This is definitely not ripgrep's strong suit. When you use ripgrep's -z/--search-zip flag, all it's doing is shelling out to your gzip/xz/whatever executable to do the decompression work, which is then streamed into ripgrep for searching. So if your search speed tanks when using -z/--search-zip, it's likely because your decompression tools are slow, not because of ripgrep. But it's a fair comparison from sneller's perspective, because it seems to integrate the two.
Second is the issue of multi-threaded search. In ripgrep, the fundamental unit of work is "search a file." ripgrep has no support for more granular parallelism. That is, if you give it one file, it's limited to doing a single threaded search. ripgrep could do more granular parallelism, but it hasn't been obviously worth it to me. If most searches are on a directory tree, then parallelizing at the level of each file is almost certainly good enough. Making ripgrep's parallelism more fine grained is a fair bit of work too, and there would be a lot of fiddly stuff to get right. If I could run sneller easily, I'd probably try to see how it does in a more varied workload than what is presented in this blog. :-)
And finally some corrections:
> However, when using a single thread, ripgrep appears to be slightly faster.
Not just slightly faster, over 2x faster!
The single threaded results for Regex2 and Regex3 for Sneller are quite nice! I'd be interested in hearing more about what you're doing in the Regex2 case, since Sneller and ripgrep are about on par with the Regex3 case. Maybe a fail fast optimization?
> The reason for this is that ripgrep uses the Boyer-Moore string search algorithm, which is a pattern matching algorithm that is often used for searching for substrings within larger strings. It is particularly efficient when the pattern being searched for is relatively long and the alphabet of characters being searched over is relatively small. Sneller does not use this substring search algorithm and as a result is slower than ripgrep with substrings. However, when long substrings are not present, Sneller outperforms ripgrep.
ripgrep has never used Boyer-Moore. (Okay, some years ago, ripgrep could use Boyer-Moore in certain niche cases. But that hasn't been the case for a while and it was never the thing most commonly used). What ripgrep uses today is succinctly described here: https://github.com/BurntSushi/memchr#algorithms-used (But it has always eschewed algorithms like Boyer-Moore in favor of more heuristic-y approaches based on a background frequency distribution of bytes.)
I think I would also contest the claim that "long substrings" are the key here. ripgrep is plenty fast with short substrings too. You're correct that if you have no literals then ripgrep will get slower because it has to fall back to the regex engine. But I'd like to see more robust benchmarks there. Your Regex2 and Regex3 benchmarks raise more questions than it answers. :-)
> Although the resulting .dot and .svg files may be somewhat clunky, we can still observe from the graph that the number of nodes and edges are small enough to use the branchless IceLake implementation. In this particular case, we only need 8 bits to encode the number of nodes and the number of distinct edges, enabling the tool to use (what we call) the 8-bit DFA implementation. For more details on how this works, see our post on regex implementations.
So this is talking about the DFA graph for the regex `Sherlock [A-Z]\w+`. It's important to point out that, in ripgrep, `\w` is Unicode aware by default. Which makes it absolutely enormous. So I think the state graph you linked is probably only for the ASCII version of that regex.
Indeed, reading your regex blog[1], it perhaps looks like a lot of the tricks you use won't work for Unicode, because Unicode tends to blow up finite automata.
If I could run Sneller, I'd probably try to poke it to see what its Unicode support looks like. From a quick glance of the source code, it also looks like you build full DFAs. So I would also try to poke it to see what happens when handed a particularly a not-so-small regex. (Building a DFA can take quite some time.)
Ah okay, I see, you put a max limit on the DFA: https://github.com/SnellerInc/sneller/blob/bb5adec564bf9869d...
Overall this is a very cool project!
[1]: https://sneller.io/blog/accelerating-regex-using-avx-512/
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SIMD with Zig
Indeed. This is how ripgrep works. It's compiled for just plain `x86_64`, but it looks for whether things like AVX2 are enabled. And if so, uses vector algorithms for substring and multi-substring search. The nice thing about dealing with strings is that the "coarse" requirement is already somewhat natural to the domain.
But, this functionality is absolutely critical. It doesn't even have to be automatic. Just the ability to compile functions with certain ISA extensions enabled, and then only call them when the requisite CPU features are enabled is enough.
In a nutshell: https://github.com/BurntSushi/memchr/blob/8037d11b4357b0f07b...
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Tree Borrows - A new aliasing model for Rust
/u/nvanille Excellent work. Evaluating whether this all makes sense is very much above my pay-grade, but I'm all in favor of making it harder to shoot yourself in the foot with unsafe. This actually happened with the memchr crate, if you're interested in those details.
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why GNU grep is fast
I'm not sure either myself. GNU libc does use SIMD, but the ones I'm aware of are all written in Assembly, like memchr. ripgrep also uses memchr, but not from libc, since the quality of memchr implementations is very hit or miss. GNU libc's is obviously very good, but things can be quite a bit slower in most other libcs (talking orders of magnitude here). Instead, I wrote my own memchr in Rust: https://github.com/BurntSushi/memchr/blob/8037d11b4357b0f07be2bb66dc2659d9cf28ad32/src/memchr/x86/avx.rs
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How can I efficiently search for a specific string in a large text file using C#?
Right. The "generic SIMD" algorithm is one I'm quite familiar with and have implemented. It's what ripgrep uses for example, although it's a little smarter than "just take the first and last bytes." ripgrep tries to guess at which bytes are the best to pick to maximize throughput by reducing false positives in the initial candidate scan. You can see the implementation here: https://github.com/BurntSushi/memchr/tree/master/src/memmem
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Checking for the absence of a string, naive AVX-512 edition
Many string search impls are adaptive and use different algorithms depending on needle and haystack lengths and possibly also contents of the needle.
E.g. https://github.com/BurntSushi/memchr#user-content-algorithms...
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Code critique/review request
Feel free to ask questions. In addition to authoring aho-corasick, I also wrote the regex crate and implemented substring search in the memchr crate.
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A note from our sponsor - Mergify
blog.mergify.com | 24 Sep 2023
Stats
BurntSushi/rust-memchr is an open source project licensed under The Unlicense which is not an OSI approved license.
The primary programming language of rust-memchr is Rust.