eopegwas reviews and mentions

• Trust: The Need for Public Understanding of How Science Works
  1 project | news.ycombinator.com | 2 Mar 2021

  a GWAS study we did on Early-Onset Preeclampsia where we had clinical and genomic data for 109 pregnant woman in Hawai'i, we put everything on GitHub.

  [1] We created a grammar for the schema, which not only allowed us to double check the type safety of our data but then also synthesize a CSV [2] with one click and stick that in the repo so that reviewers/researchers could `git clone` the repo and reproduce everything without any permissions bottlenecks (obviously the results are gibberish with the synth data, and you have to contact us to get the real data, but this way you can get the code working and then it's just a simple file move to reproduce the full results). This is the way.

  [1] https://github.com/breckuh/eopegwas/blob/master/eopClinicalS...

  [2] https://github.com/breckuh/eopegwas/blob/master/mockData/cli...