TransDecoder source (by TransDecoder)

Reviews and mentions

Posts with mentions or reviews of TransDecoder. We have used some of these posts to build our list of alternatives and similar projects.
  • Identifying protein coding genes from fna and gff files
  • Is there a way to translate all ORFs on all contigs of a given bioproject on NCBI and write them all out as fasta?
    I believe Transdecoder ( might help you. If you wanted to learn how to do this yourself, it's one of the Rosalind challenges ( that I show how to solve in a new Python/bioinformatics book I'm releasing with O'Reilly. I'd be happy to share the first five chapters if you are curious. DM for details.


Basic TransDecoder repo stats
3 months ago

TransDecoder/TransDecoder is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.

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