CoverM Alternatives
Similar projects and alternatives to CoverM
-
InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better CoverM alternative or higher similarity.
CoverM reviews and mentions
Posts with mentions or reviews of CoverM.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-06-12.
-
what would you choose to detect specific genes in metagenomics data
(3) Depends on what you are trying to achieve. If you want number of reads mapping to the genes, either use DIAMOND BLASTX or map directly with Bowtie/minimap2 (or minimap2 through a package like CoverM).
-
Filter out alignments that are less than 80% of the read length
I would recommend using CoverM
Stats
Basic CoverM repo stats
2
253
6.8
about 1 month ago
wwood/CoverM is an open source project licensed under GNU General Public License v3.0 only which is an OSI approved license.
The primary programming language of CoverM is Rust.
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com