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- Grape (Graph Representation LeArning, Predictions and Evaluation)
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Zoomable, animated scatterplots in the browser that scales over a billion points
Ideally, you'd embed the graph into 2 or 3d first, then visualize it as a scatterplot.
Visualizing the edges at scale doesnt yield nice results in general.
The way to do it is to reduce the graph to some 300d or 500d embeddings, then use TSNE/UMAP/PACMAP to reduce that to 3d. Then visualize.
My prefered way is to use some first order embedding method like GGVec in this library [1] (disclaimer I wrote it). Node2Vec and ProNE don't yield great embeddings for visualization (the first is too filamented, the second too close to the unit ball).
Another great library to do this work is GRAPE [2]. Try first-order embedding methods, or short walks on second order methods to avoid the embeddings being too filamented by long random walk sampling.
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[P] We are building a curated list of open source tooling for data-centric AI workflows, looking for contributions.
For graph embeddings, there's quite a few. I'd recommend this one, but there's also this one (disclaimer: I'm the author) or this one, more of a DGL library.
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AnacletoLAB/grape is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of grape is Jupyter Notebook.