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annoy
Approximate Nearest Neighbors in C++/Python optimized for memory usage and loading/saving to disk
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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To improve the running time you could try an approximate algorithm: https://github.com/spotify/annoy/
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