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My first assumption was, that I should be able to generate markdown from the source. Same ruby and rails does now, but only tweaking a couple of parameters to generate .md files instead. YARD is being used for that and it supports any markup rdoc or yard.
It seems, that most of the ruby itself, rails and all other gems I've stumbled upon work with rdoc. Even DASH clearly indicates, that all gem documentation that they store are based of RDoc.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a more popular project.
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