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There's even a demo (plug: in a talk I co-presented) of running a RISC-V emulator where its memory is stored in an OCI registry: https://www.youtube.com/watch?v=Xt_G-pUArTM
These all tend to include a CLI to collect/generate/validate resources and push/move/pull them, but the underlying implementation is roughly the same -- package content in a tarball, generate some JSON pointing to it, push that JSON to the registry (with auth).
If you're interested in exploring it for your use case let me know, I'd be happy to give you some pointers.
I don't know about replacing Make with Docker, but I use the two together to good effect. One of my favorite hacks is adding a 'docker-%' rule in my Makefile to run make commands in a Docker image[1]. It's a bit mind-bending, and there's a few gotchas, but it works surprisingly well for simple rules.
[1]: https://github.com/kevin-hanselman/dud/blob/e98de8fcdf7ad564...
We had the some learning and decided to go down the path "Use docker for running, not building". That's why we decided to build https://bob.build on top of the nix package-manager. This allows reproducible builds on your system without touching docker.
I needed to iterate on bare metal images. Docker buildkit turned out to be an awesome environment for composing minimal/fast vm/bare-metal images.
https://github.com/tarasglek/metallize/
Cross-compiling binaries for many platforms and architectures using Docker and QEMU[1] was a neat way I found to support more targets without having to have the hardware.
[1] https://www.qemu.org/