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But if for some reason you need to do it through Windows, there is probably a driver you need for the particular Linux filesystem type. Judging from this, Batocera lets you choose, and you probably chose either ext4 or btrfs. For ext4, you'd need to either to go through the Windows Subsystem for Linux, or use something like ext4sd. For btrfs, again, you could try WSL, or else something like Win Btrfs.
But if for some reason you need to do it through Windows, there is probably a driver you need for the particular Linux filesystem type. Judging from this, Batocera lets you choose, and you probably chose either ext4 or btrfs. For ext4, you'd need to either to go through the Windows Subsystem for Linux, or use something like ext4sd. For btrfs, again, you could try WSL, or else something like Win Btrfs.