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I asked this on the libraries mailing list but thought posting here would bring in potentially more responses. I made a recent change to the behaviour of lookup and find (see here for more details: https://github.com/haskell/containers/pull/800).
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apecs uses IntMaps all over the place and is benchmarked. They're the most common backing data structure for Components I'd say.
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https://github.com/jgm/unicode-collation uses IntMap quite a bit and has benchmarks.
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If you visit https://haskell-code-explorer.mfix.io/package/containers-0.6.0.1/show/Data/IntMap/Internal.hs#L1157 and click on IntMap, it'll show you all the usages of IntMap across "a subset of packages from a Stackage snapshot" (as formulated in the project's README).