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I've compiled all the resources that I know about: * Graphviz can be accessed via NetworkX. It has a few layouts that are pretty good in many cases. * iGraph has some layout options. It requires conversion to iGraph format obviously but that's not a huge issue. * Force Atlas 2 has an implementation for NetworkX. Though, this package isn't updated very often.
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The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a more popular project.