Need help with Biopython examples

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics
Science and Data analysis Python Bioinformatics Genomics Biopython

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  • Biopython

    Official git repository for Biopython (originally converted from CVS)

    You can then copy the contents of the file directly ( press Ctrl + A on the webpage, and then Ctrl + C on the text editor you are using ). You can also download the file using a command line tool, such as wget or curl if you are familiar with those. For example, if I wanted to download the ls_orchid.gbk file, I would find the raw version as above and simply open a terminal and type:

  • biopython-notebook

    Notebooks to introduce biopython

    Goo luck! I found this version of the tutorial using notebooks, so it may be easier to follow : https://github.com/tiagoantao/biopython-notebook but it seems to still be a work in progress so maybe it is incomplete.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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