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I don't know what Obsidian is, but if it's requiring old TeX math mode toggles (the double dollar sign), then it might not actually be using LaTeX underneath. Many tools that provide LaTeX-style syntax for equations are actually using something like MathJaX, BlahTex, or some custom system by which to translate LaTeX-like syntax into their own equation rendering. This often means you only get a pre-defined subset of what's possible with LaTeX (and the results are never quite faithful to how LaTeX would typeset them).
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a more popular project.