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Yes, non-rust dependencies can be a pain. We addressed this issue in three ways: 1. Sometimes, it just works™ if the crate has a copy of the C code and uses the cc crate to compile it. It's usually slow to compile C in a build script, but it works. 2. Sometimes, we write a custom BUILD script for direct dependencies and link external libraries by hand. Example: lmdb and lmdb-sys. 3. If all of the above is not an option or is too much work, we add a native library to the Docker container that runs our builds.
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I've been thinking this too time to time and tried to apply some poc to one of the codebase (https://github.com/swc-project/swc) but wasn't able to make notable progress. There were couple of reasons and curious how you could solve it.
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We used cargo2nix to generate top-level Cargo.nix file that we committed to the repository (we didn't allow generating nix files on CI for security and reproducibility reasons).