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There is: It's called appimage, and it even allows you to distribute software by sharing the link with another user directly.
Install your choice of extension for systray app icons (I like AppIndicator / KStatusNotifier)
It is a bug
No, you can setup third-party Snap stores. See this repo for an example: https://gitlab.com/lol-snap/lol-server
There are lots of flatpak applications that don't work under Ubuntu, e.g. https://github.com/flathub/net.sonic_pi.SonicPi/issues/9 How do you not know this?