FUSTA: quickly & easily edit, slice, 'n dice ((very) large) FASTA files

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  • fusta

    A FUSE filesystem to browse & edit FASTA files

  • We recently published (LGPLv3-compatible) FUSTA, a software utility dedicated to the manipulation of FASTA files, especially adding & removing sequences, easily accessing subsequences (wouldn't cat myfasta/get/chr3:10000-12000 be pretty nifty?), altering sequences (think case modification), renaming sequences (gosh, should we use chrX or X?), and accessing individual sequences as independent files (you don't really need to blast all of these 11864 proteins, do you?).

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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  • nushell

    A new type of shell

  • Now, I guess the deeper question is ‶is the text-based, line-delimited, pipe-oriented, interaction model between programs that don't know each other still relevant″; and we have seen new, more structured, approaches being tested, for instance with PowerShell or NuShell.

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