Think About Your Audience (with Bioconductor)

This page summarizes the projects mentioned and recommended in the original post on

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  • SonarQube - Static code analysis for 29 languages.
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  • sweave2rmd

    A project for converting Bioconductor Sweave documents to Rmd

    My project is Sweave2Rmd, which is a project to convert all Bioconductor Sweave vignettes to Rmd.

  • Lua

    Lua is a powerful, efficient, lightweight, embeddable scripting language. It supports procedural programming, object-oriented programming, functional programming, data-driven programming, and data description.

    Lua is a lightweight, high-level, multi-paradigm programming language designed primarily for embedded use in applications. Lua is cross-platform, since the interpreter of compiled bytecode is written in ANSI C, and Lua has a relatively simple C API to embed it into applications.

  • SonarQube

    Static code analysis for 29 languages.. Your projects are multi-language. So is SonarQube analysis. Find Bugs, Vulnerabilities, Security Hotspots, and Code Smells so you can release quality code every time. Get started analyzing your projects today for free.

  • pandoc

    Universal markup converter

    In my first two weeks, I found almost everything confusing. I had not interacted with Latex and Pandoc that much before. Given R is an older programming language and the code was written long ago, syntax was different for some elements and I had to learn what some things mean, how they were done before and how they are done now. The good thing is, as human beings one of our super powers is to learn, adapt to change and . That has really helped me throughout the internship till now.

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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