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I use pylsp, which as of writing does not support auto-imports in the latest tagged version (1.6.0), (but might work with the git develop branch ).
I think rope is the standard for refactoring, and should provide autoimports soon, though pyright might also be good for that.
Currently the best way to use rope for refactoring (including extract, inlining, reorganise import, plus many more) in Neovim is with pylsp-rope and your preferred LSP client. pylsp-rope is going to be the main focus of bringing rope capabilities to various IDEs and text editors. I'll have to find the time for this, but I'm planning to overhaul the rope support in core pylsp to make it work even better.